{ "cells": [ { "cell_type": "markdown", "metadata": {}, "source": [ "## Filtering the data for the LSTM: removes all the rows, where we used the revert button, when the participant performed a wrong gesture\n" ] }, { "cell_type": "code", "execution_count": null, "metadata": {}, "outputs": [], "source": [ "%matplotlib inline\n", "\n", "from scipy.odr import *\n", "from scipy.stats import *\n", "import numpy as np\n", "import pandas as pd\n", "import os\n", "import time\n", "import matplotlib.pyplot as plt\n", "import ast\n", "from multiprocessing import Pool, cpu_count\n", "\n", "import scipy\n", "\n", "from IPython import display\n", "from matplotlib.patches import Rectangle\n", "\n", "from sklearn.metrics import mean_squared_error\n", "import json\n", "\n", "import scipy.stats as st\n", "from sklearn.metrics import r2_score\n", "\n", "\n", "from matplotlib import cm\n", "from mpl_toolkits.mplot3d import axes3d\n", "import matplotlib.pyplot as plt\n", "\n", "import copy\n", "\n", "from sklearn.model_selection import LeaveOneOut, LeavePOut\n", "\n", "from multiprocessing import Pool\n", "import cv2" ] }, { "cell_type": "code", "execution_count": null, "metadata": {}, "outputs": [], "source": [ "dfAll = pd.read_pickle(\"DataStudyCollection/AllData.pkl\")\n", "dfAll.head()" ] }, { "cell_type": "code", "execution_count": null, "metadata": {}, "outputs": [], "source": [ "df_actual = dfAll[(dfAll.Actual_Data == True) & (dfAll.Is_Pause == False)]\n", "df_actual.head()" ] }, { "cell_type": "code", "execution_count": null, "metadata": {}, "outputs": [], "source": [ "print(\"all: %s, actual data: %s\" % (len(dfAll), len(df_actual)))" ] }, { "cell_type": "code", "execution_count": null, "metadata": {}, "outputs": [], "source": [ "%%time\n", "# filter out all gestures, where the revert button was pressed during the study and the gestrue was repeated\n", "def is_max(df):\n", " df_temp = df.copy(deep=True)\n", " max_version = df_temp.RepetitionID.max()\n", " df_temp[\"IsMax\"] = np.where(df_temp.RepetitionID == max_version, True, False)\n", " df_temp[\"MaxRepetition\"] = [max_version] * len(df_temp)\n", " return df_temp\n", "\n", "df_filtered = df_actual.copy(deep=True)\n", "df_grp = df_filtered.groupby([df_filtered.userID, df_filtered.TaskID, df_filtered.VersionID])\n", "pool = Pool(cpu_count() - 1)\n", "result_lst = pool.map(is_max, [grp for name, grp in df_grp])\n", "df_filtered = pd.concat(result_lst)\n", "df_filtered = df_filtered[df_filtered.IsMax == True]\n", "pool.close()" ] }, { "cell_type": "code", "execution_count": null, "metadata": {}, "outputs": [], "source": [ "df_filtered.to_pickle(\"DataStudyCollection/df_lstm.pkl\")" ] }, { "cell_type": "code", "execution_count": null, "metadata": {}, "outputs": [], "source": [ "print(\"actual: %s, filtered data: %s\" % (len(df_actual), len(df_filtered)))" ] }, { "cell_type": "code", "execution_count": null, "metadata": {}, "outputs": [], "source": [] } ], "metadata": { "kernelspec": { "display_name": "Python 3", "language": "python", "name": "python3" }, "language_info": { "codemirror_mode": { "name": "ipython", "version": 3 }, "file_extension": ".py", "mimetype": "text/x-python", "name": "python", "nbconvert_exporter": "python", "pygments_lexer": "ipython3", "version": "3.6.7" } }, "nbformat": 4, "nbformat_minor": 2 }